Biochemistry and Molecular Biology

Research Output 1968 2020

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2017
4 Citations (Scopus)

Computational methods and correlation of Exon-skipping events with splicing, transcription, and epigenetic factors

Wang, J., Ye, Z., Huang, T. H., Shi, H. & Jin, V. X., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 163-170 8 p. (Methods in Molecular Biology; vol. 1513).

Research output: Chapter in Book/Report/Conference proceedingChapter

Epigenomics
Exons
Transcription Factors
RNA
Protein Isoforms

Preparation of membrane models of gram-negative bacteria and their interaction with antimicrobial peptides studied by CD and NMR

Hicks, R., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 231-245 15 p. (Methods in Molecular Biology; vol. 1548).

Research output: Chapter in Book/Report/Conference proceedingChapter

Gram-Negative Bacteria
Peptides
Membranes
Lipopolysaccharides
Phospholipids

The Relationship Between Probiotics and Dietary Fiber Consumption and Cardiovascular Health

Prasad, P. D., Gurav, A., Zhu, H., Martin, P. M., Vijay-Kumar, M. & Singh, N., Jul 13 2017, Dietary Fiber for the Prevention of Cardiovascular Disease: Fiber's Interaction between Gut Micoflora, Sugar Metabolism, Weight Control and Cardiovascular Health. Elsevier Inc., p. 73-90 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Probiotics
Dietary Fiber
Cardiovascular Diseases
Health
Vegetables
2016
2 Citations (Scopus)

CD4 T Cells in Antitumor Immunity

Fesenkova, V., Sultan, H. & Celis, E., Apr 27 2016, Immunity to Pathogens and Tumors. Elsevier Inc., Vol. 4. p. 441-450 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Helper-Inducer T-Lymphocytes
Immunity
T-Lymphocytes
T-Lymphocyte Subsets
Neoplasms

Computational Approaches in Next-Generation Sequencing Data Analysis for Genome-Wide DNA Methylation Studies

Choi, J. H. & Shi, H., Sep 6 2016, Computational Methods for Next Generation Sequencing Data Analysis. wiley, p. 197-226 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genes
Transcription factors
Methylation
Gene expression
DNA

The effects of nanoparticles on dendritic cells

Fesenkova, V., Apr 1 2016, Engineered Nanomaterials and the Immune Cell Function. World Scientific Publishing Co. Pte Ltd, Vol. 3. p. 69-84 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanoparticles
Dendritic Cells
Vaccines
Chemical activation
Immune system
2015

Introduction to virology

Rosenthal, K. S., Jan 1 2015, Practical Handbook of Microbiology, Third Edition. CRC Press, p. 963-986 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Virology
Viruses
Disease
Virus Diseases
Viral Structures

Regulation of Breast Cancer Stem Cells by Mesenchymal Stem Cells in the Metastatic Niche

Malik, F., Korkaya, H., Clouthier, S. G. & Wicha, M. S., Mar 6 2015, Principles of Stem Cell Biology and Cancer: Future Applications and Therapeutics. Wiley-Blackwell, p. 123-143 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Neoplastic Stem Cells
Stem cells
Mesenchymal Stromal Cells
Breast Neoplasms
Tumors

Tracking of administered progenitor cells in brain injury and stroke by magnetic resonance imaging

Achyut, B. R. & Arbab, A. S., Jan 1 2015, Cell Therapy for Brain Injury. Springer International Publishing, p. 187-212 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Magnetic resonance
Brain Injuries
Brain
Stem cells
Stem Cells
2014
3 Citations (Scopus)

Butyrate-Mediated Protection Against Colonic Inflammation And Colon Carcinogenesis: Role Of Butyrate Transporters And Butyrate Receptors

Vadivel, G., Prasad, P. D., Thangaraju, M., Martin, P. M. & Singh, N., Apr 1 2014, Butyrate: Food Sources, Functions and Health Benefits. Nova Science Publishers, Inc., p. 157-176 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Butyrates
Colon
Carcinogenesis
Inflammation
Neurons

Translating mammary stem cell and cancer stem cell biology to the clinics

Pathania, R., Ganapathy, V. & Thangaraju, M., Apr 1 2014, Stem Cells and Human Diseases. Springer Netherlands, Vol. 9789400728011. p. 433-450 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Neoplastic Stem Cells
Cell Biology
Breast
Stem Cells
Breast Neoplasms
2013

Presence of an early lineage stem cell phenotype in meningioma-initiating cells

Rath, P., Wilson, J. M. & Shi, H., Jan 1 2013, Stem Cells and Cancer Stem Cells, Volume 10: Therapeutic Applications in Disease and Injury. Springer Netherlands, p. 211-218 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Meningioma
Stem Cells
Phenotype
Brain Neoplasms
Neoplastic Stem Cells
2012
19 Citations (Scopus)

Application of unnatural amino acids to the de novo design of selective antibiotic peptides

Hicks, R. P. & Russell, A. L., Jan 1 2012, Unnatural Amino Acids: Methods and Protocols. Pollegioni, L. & Servi, S. (eds.). p. 135-167 33 p. (Methods in Molecular Biology; vol. 794).

Research output: Chapter in Book/Report/Conference proceedingChapter

Anti-Bacterial Agents
Amino Acids
Peptides
Bacteria
Therapeutics
2010
1 Citation (Scopus)

Post-translational modification of p53 by ubiquitin

Yan, C., Jan 1 2010, Transcription Factors: Methods and Protocols. Humana Press Inc., p. 305-315 11 p. (Methods in Molecular Biology; vol. 647).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ubiquitination
Post Translational Protein Processing
Ubiquitin
Cell Aging
DNA Damage
1 Citation (Scopus)

The epigenetics of age-related cancers

Taylor, K. H., Bennett, L. B., Arthur, G. L., Shi, H. & Caldwell, C. W., Jan 1 2010, Epigenetics of Aging. Springer New York, p. 285-313 29 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Epigenomics
Aging of materials
Neoplasms
Histone Code
Polycomb-Group Proteins
2009
1 Citation (Scopus)

Basics of Molecular Biology, Genetic Engineering, and Metabolic Engineering

Wang, M. X. & Shi, H., Sep 22 2009, Systems Biology and Synthetic Biology. John Wiley & Sons, Inc., p. 9-66 58 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metabolic engineering
Genetic engineering
Molecular biology
8 Citations (Scopus)

Soluble Epidermal Growth Factor Receptor: A Biomarker of Epithelial Ovarian Cancer

Baron, A. T., Lafky, J. M., Boardman, C. H., Cora, E. M., Buenafe, M. C., Liu, D., Rademaker, A., Fishman, D. A., Podratz, K. C., Reiter, J. L. & Maihle, N. J., Oct 15 2009, Ovarian Cancer: Second Edition. Stack, S. & Fishman, D. (eds.). p. 189-202 14 p. (Cancer Treatment and Research; vol. 149).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neoplasm Proteins
erbB-1 Genes
Tertiary Protein Structure
Epidermal Growth Factor Receptor
Ovarian Neoplasms
2007
5 Citations (Scopus)

Methods for labeling nonphagocytic cells with mr contrast agents

Frank, J. A., Anderson, S. A. & Arbab, A. S., Jan 1 2007, Molecular and Cellular MR Imaging. CRC Press, p. 295-324 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Labeling
Contrast Media
Imaging techniques
Gadolinium
Magnetic resonance
2006
3 Citations (Scopus)

Mammalian and other eukaryotic selenocysteine tRNAs

Carlson, B. A., Xu, X. M., Shrimali, R., Sengupta, A., Yoo, M. H., Irons, R., Zhong, N., Hatfield, D. L., Lee, B. J., Lobanov, A. V. & Gladyshev, V. N., Jan 1 2006, Selenium: Its Molecular Biology and Role in Human Health, Second Edition. Springer US, p. 29-37 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Selenoproteins
Selenocysteine
Selenium
Protein Isoforms
Transfer RNA
1 Citation (Scopus)

Mouse models for assessing the role of selenoproteins in health and development

Carlson, B. A., Xu, X. M., Shrimali, R., Sengupta, A., Yoo, M. H., Zhong, N., Hatfield, D. L., Irons, R., Davis, C. D., Lee, B. J., Novoselov, S. V. & Gladyshev, V. N., Jan 1 2006, Selenium: Its Molecular Biology and Role in Human Health, Second Edition. Springer US, p. 333-341 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Selenoproteins
Transgenes
Health
Housekeeping
Genetically Modified Animals
2004

Placenta as a nutritional unit

Prasad, P. D., Jones, C. R. & Ganapathy, V., Jan 1 2004, Perinatal Nutrition: Optimizing Infant Health and Development. CRC Press, p. 77-110 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Placenta
Food
Fetal Development
Trophoblasts
Fetus
2003
25 Citations (Scopus)

Cellular uptake of amino acids: Systems and regulation

Ganapathy, V., Inoue, K., Prasad, P. D. & Ganapathy, M. E., Jan 1 2003, Metabolic and Therapeutic Aspects of Amino Acids in Clinical Nutrition, Second Edition. CRC Press, p. 63-78 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Amino Acids
Substrate Specificity
Biological membranes
Amino Acid Transport Systems
Cell membranes

Ligand-independent oncogenic signaling by the epidermal growth factor receptor: v-ErbB as a paradigm

Boerner, J. L., Danielsen, A. & Maihle, N. J., Dec 19 2003, The EGF Receptor Family: Biologic Mechanisms and Role in Cancer. Elsevier Inc., p. 115-125 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Epidermal Growth Factor Receptor
Ligands
Cell Surface Receptors
erbB-1 Genes
Mutation