Biochemistry and Molecular Biology

Research Output 1968 2019

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Conference contribution
2015
2 Citations (Scopus)

New approaches to identify cancer heterogeneity in DNA methylation studies using the lepage test and multinomial logistic regression

Lee, S., Piao, Y., Shi, H. & Choi, J-H., Oct 16 2015, 2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2015. Institute of Electrical and Electronics Engineers Inc., 7300318. (2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

DNA Methylation
Logistics
Tumors
Logistic Models
Cells
2011

A software package for next-gen bisulfite sequencing data analysis

Choi, J-H., Ryu, D. S., Sureshchandra, S., Shi, H. & Cho, H. G., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1061-1062 2 p. 6112561. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thymine
Cytosine
DNA Methylation
Software packages
Software
2009
1 Citation (Scopus)

Label-free analysis of DNA methylation using optofluidic ring resonators

Suter, J. D., Howard, D. J., Shi, H., Caldwell, C. W. & Fan, X., Dec 1 2009, proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: : Engineering the Future of Biomedicine, EMBC. IEEE Computer Society, p. 2760-2762 3 p. 5333866. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cytosine
Fluidics
DNA Methylation
Labels
Resonators

Label-free DNA methylation analysis using the optofluidic ring resonator sensor

Suter, J. D., Howard, D. J., Caldwell, C. W., Shi, H. & Fan, X., Sep 14 2009, Photonic Microdevices/Microstructures for Sensing. 732208. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7322).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optofluidics
Ring Resonator
methylation
Methylation
Labels
2007
1 Citation (Scopus)

Label-free DNA detection using liquid core optical ring resonators

Suter, J. D., White, I. M., Zhu, H., Shi, H., Caldwell, C. W. & Fan, X., Dec 1 2007, Sensors for Harsh Environments III. 67570F. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6757).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optical resonators
Labels
DNA
deoxyribonucleic acid
resonators
2006

AlignScope: A visual mining tool for gene team finding with whole genome alignment

Jin, H. J., Kim, H. J., Choi, J-H. & Cho, H. G., Dec 1 2006, Proceedings of the 4th Asia-Pacific Bioinformatics Conference, APBC 2006. p. 69-78 10 p. (Series on Advances in Bioinformatics and Computational Biology; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes
Gene transfer
Visualization
1 Citation (Scopus)

In silico three dimensional pharmacophore models to aid the discovery and design of new antimalarial agents

Bhattacharjee, A. K., Kartell, M. G., Nichols, D. A., Hicks, R. P., Van Hamont, J. E. & Milhous, W. K., Jan 1 2006, Computational Science - ICCS 2006: 6th International Conference, Proceedings. Springer Verlag, p. 387-394 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3991 LNCS - I).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Inhibitor
Screening
Dyes
Three-dimensional
Drugs
2005

PLATCOM: A platform for computational comparative genomics on the Web

Choi, K., Choi, J. H., Saple, A., Wang, Z., Lee, J. & Kim, S., Dec 1 2005, 2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts. p. 27-28 2 p. 1540526. (2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genomics
2002

Tryptophan catabolism, T cell responses & tissue transplantation: Innovative approaches to regulating immune responses

Mellor, A. L., Munn, D. H., Chandler, P., Keskin, D., Johnson, T., Baban, B. M. B. & Lee, J., Dec 1 2002, Third Smith and Nephew International Symposium - Translating Tissue Engineering into Products.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transplantation (surgical)
T-cells
Mammals
Antigens
Amino acids