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Author

  • Huidong Shi
2013

Analyzing the cancer methylome through targeted bisulfite sequencing

Lee, E. J., Luo, J., Wilson, J. M. & Shi, H., Nov 1 2013, In : Cancer Letters. 340, 2, p. 171-178 8 p.

Research output: Contribution to journalReview article

48 Scopus citations

An Inherently Bifunctional Subset of Foxp3+ T Helper Cells Is Controlled by the Transcription Factor Eos

Sharma, M., Huang, L., Choi, J. H., Lee, E. J., Wilson, J., Lemos, H., Pan, F., Blazar, B., Pardoll, D., Mellor, A., Shi, H. & Munn, D., May 23 2013, In : Immunity. 38, 5, p. 998-1012 15 p.

Research output: Contribution to journalArticle

108 Scopus citations

A systematic evaluation of miRNA: MRNA interactions involved in the migration and invasion of breast cancer cells

Luo, D., Wilson, J. M., Harvel, N., Liu, J., Pei, L., Huang, S., Hawthorn, L. & Shi, H., Mar 5 2013, In : Journal of Translational Medicine. 11, 1, 57.

Research output: Contribution to journalArticle

90 Scopus citations

HOXC9 directly regulates distinct sets of genes to coordinate diverse cellular processes during neuronal differentiation

Wang, X., Choi, J-H., Ding, J., Yang, L., Ngoka, L. C., Lee, E. J., Zha, Y., Mao, L., Jin, B., Ren, M., Cowell, J. K., Huang, S., Shi, H., Cui, H. & Ding, H., Nov 25 2013, In : BMC Genomics. 14, 1, 830.

Research output: Contribution to journalArticle

15 Scopus citations

MBD3 Localizes at Promoters, Gene Bodies and Enhancers of Active Genes

Shimbo, T., Du, Y., Grimm, S. A., Dhasarathy, A., Mav, D., Shah, R. R., Shi, H. & Wade, P. A., 2013, In : PLoS Genetics. 9, 12, e1004028.

Research output: Contribution to journalArticle

68 Scopus citations

Network-guided genetic screening for metastasis-related microRNA-200c in breast cancer

Wang, S., Xiao, Y. Q., Liu, Z. Q., Yang, X. H., Xiong, X. L., Zhu, W. F., Shi, H. & Luo, D. Y., Dec 9 2013, In : Tumor. 33, 2, p. 111-118 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

Presence of an early lineage stem cell phenotype in meningioma-initiating cells

Rath, P., Wilson, J. M. & Shi, H., Jan 1 2013, Stem Cells and Cancer Stem Cells, Volume 10: Therapeutic Applications in Disease and Injury. Springer Netherlands, p. 211-218 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012
141 Scopus citations

Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia

Pei, L., Choi, J-H., Liu, J., Lee, E. J., McCarthy, B., Wilson, J. M., Speir, E., Awan, F., Tae, H., Arthur, G., Schnabel, J. L., Taylor, K. H., Wang, X., Xu, D., Ding, H., Munn, D. H., Caldwell, C. W. & Shi, H., Jun 2012, In : Epigenetics. 7, 6, p. 567-578 12 p.

Research output: Contribution to journalArticle

64 Scopus citations
2011

A software package for next-gen bisulfite sequencing data analysis

Choi, J-H., Ryu, D. S., Sureshchandra, S., Shi, H. & Cho, H. G., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 1061-1062 2 p. 6112561. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Isolation and characterization of a population of stem-like progenitor cells from an atypical meningioma

Rath, P., Miller, D. C., Litofsky, N. S., Anthony, D. C., Feng, Q., Franklin, C., Pei, L., Free, A., Liu, J., Ren, M., Kirk, M. D. & Shi, H., Apr 2011, In : Experimental and Molecular Pathology. 90, 2, p. 179-188 10 p.

Research output: Contribution to journalArticle

31 Scopus citations

Loss of methyl-CpG-binding domain protein 2 enhances endothelial angiogenesis and protects mice against hind-limb ischemic injury

Rao, X., Zhong, J., Zhang, S., Zhang, Y., Yu, Q., Yang, P., Wang, M-H., Fulton, D. J., Shi, H., Dong, Z., Wang, D. & Wang, C. Y., Jun 28 2011, In : Circulation. 123, 25, p. 2964-2974 11 p.

Research output: Contribution to journalArticle

60 Scopus citations

Metabolomic Profiling Reveals Potential Markers and Bioprocesses Altered in Bladder Cancer Progression

Putluri, N., Shojaie, A., Vasu, V. T., Vareed, S. K., Nalluri, S., Putluri, V., Thangjam, G. S., Panzitt, K., Tallman, C. T., Butler, C., Sana, T. R., Fischer, S. M., Sica, G., Brat, D. J., Shi, H., Palapattu, G. S., Lotan, Y., Weizer, A. Z., Terris, M. K., Shariat, S. F. & 2 others, Michailidis, G. & Sreekumar, A., Dec 15 2011, In : Cancer Research. 71, 24, p. 7376-7386 11 p.

Research output: Contribution to journalArticle

111 Scopus citations

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing

Lee, E. J., Pei, L., Srivastava, G., Joshi, T., Kushwaha, G., Choi, J-H., Robertson, K. D., Wang, X., Colbourne, J. K., Zhang, L., Schroth, G. P., Xu, D., Zhang, K. & Shi, H., Oct 2011, In : Nucleic Acids Research. 39, 19

Research output: Contribution to journalArticle

46 Scopus citations