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Article
Genome wide DNA differential methylation regions in colorectal cancer patients in relation to blood related family members, obese and non-obese controls - A preliminary report
Shiao, S. P. K., Xiao, H., Dong, L., Wang, X., Liu, K., She, J. & Shi, H., May 22 2018, In: Oncotarget. 9, 39, p. 25557-25571 15 p.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia
Pei, L., Choi, J-H., Liu, J., Lee, E. J., McCarthy, B., Wilson, J. M., Speir, E., Awan, F., Tae, H., Arthur, G., Schnabel, J. L., Taylor, K. H., Wang, X., Xu, D., Ding, H., Munn, D. H., Caldwell, C. W. & Shi, H., Jun 2012, In: Epigenetics. 7, 6, p. 567-578 12 p.Research output: Contribution to journal › Article › peer-review
Open Access77 Scopus citations -
Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing
Choi, J-H., Li, Y., Guo, J., Pei, L., Rauch, T. A., Kramer, R. S., Macmil, S. L., Wiley, G. B., Bennett, L. B., Schnabel, J. L., Taylor, K. H., Kim, S., Xu, D., Sreekumar, A., Pfeifer, G. P., Roe, B. A., Caldwell, C. W., Bhalla, K. N. & Shi, H., 2010, In: PloS one. 5, 9, e13020.Research output: Contribution to journal › Article › peer-review
38 Scopus citations -
Genome-wide gene expression profiles of the developing mouse hippocampus
Mody, M., Cao, Y., Cui, Z., Tay, K. Y., Shyong, A., Shimizu, E., Pham, K., Schultz, P., Welsh, D. & Tsien, J. Z., Jul 17 2001, In: Proceedings of the National Academy of Sciences of the United States of America. 98, 15, p. 8862-8867 6 p.Research output: Contribution to journal › Article › peer-review
Open Access165 Scopus citations -
Genome-wide linkage analysis and evidence of gene-by-gene interactions in a sample of 362 multiplex Parkinson disease families
Pankratz, N., Nichols, W. C., Uniacke, S. K., Halter, C., Murrell, J., Rudolph, A., Shults, C. W., Conneally, P. M., Foroud, T., Truong, D., Pathak, M., Tran, A., Rodnitzky, R., Dobson, J., Koller, W., Weiner, W., Lyons, K., Kurlan, R., Berry, D., Bertoni, J., & 71 others , Oct 15 2003, In: Human Molecular Genetics. 12, 20, p. 2599-2608 10 p.Research output: Contribution to journal › Article › peer-review
128 Scopus citations -
Genome-Wide linkage scan for primary open angle glaucoma: Influences of ancestry and age at diagnosis
Crooks, K. R., Allingham, R. R., Qin, X., Liu, Y., Gibson, J. R., Santiago-Turla, C., Larocque-Abramson, K. R., Del Bono, E., Challa, P., Herndon, L. W., Akafo, S., Wiggs, J. L., Schmidt, S. & Hauser, M. A., 2011, In: PloS one. 6, 7, e21967.Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Genome-wide Linkage Screen in Familial Parkinson Disease Identifies Loci on Chromosomes 3 and 18
Gao, X., Martin, E. R., Liu, Y., Mayhew, G., Vance, J. M. & Scott, W. K., Apr 10 2009, In: American journal of human genetics. 84, 4, p. 499-504 6 p.Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
Genome-wide meta-analysis identifies 127 open-angle glaucoma loci with consistent effect across ancestries
Biobank Japan project, FinnGen study, UK Biobank Eye and Vision Consortium, GIGA study group, 23 and Me Research Team, NEIGHBORHOOD Consortium & ANZRAG consortium, Dec 1 2021, In: Nature communications. 12, 1, 1258.Research output: Contribution to journal › Article › peer-review
Open Access63 Scopus citations -
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
Adkins, D. E., Åberg, K., McClay, J. L., Bukszár, J., Zhao, Z., Jia, P., Stroup, T. S., Perkins, D., McEvoy, J. P., Lieberman, J. A., Sullivan, P. F. & Van Den Oord, E. J. C. G., Mar 2011, In: Molecular Psychiatry. 16, 3, p. 321-332 12 p.Research output: Contribution to journal › Article › peer-review
131 Scopus citations -
Genome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia
McClay, J. L., Adkins, D. E., Berg, K., Bukszár, J., Khachane, A. N., Keefe, R. S. E., Perkins, D. O., McEvoy, J. P., Stroup, T. S., Vann, R. E., Beardsley, P. M., Lieberman, J. A., Sullivan, P. F. & Van Den Oord, E. J. C. G., Feb 2011, In: Neuropsychopharmacology. 36, 3, p. 616-626 11 p.Research output: Contribution to journal › Article › peer-review
95 Scopus citations -
Genome-wide target profiling of piggyBac and Tol2 in HEK 293: Pros and cons for gene discovery and gene therapy
Meir, Y. J. J., Weirauch, M. T., Yang, H. S., Chung, P. C., Yu, R. K. & Wu, S. C. Y., Mar 30 2011, In: BMC Biotechnology. 11, 28.Research output: Contribution to journal › Article › peer-review
60 Scopus citations -
Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas
The Cancer Genome Atlas Research Network, Apr 3 2018, In: Cell Reports. 23, 1, p. 194-212.e6Research output: Contribution to journal › Article › peer-review
Open Access168 Scopus citations -
Genomic analysis identified a potential novel molecular mechanism for high-altitude adaptation in sheep at the Himalayas
Gorkhali, N. A., Dong, K., Yang, M., Song, S., Kader, A., Shrestha, B. S., He, X., Zhao, Q., Pu, Y., Li, X., Kijas, J., Guan, W., Han, J., Jiang, L. & Ma, Y., Jul 22 2016, In: Scientific reports. 6, 29963.Research output: Contribution to journal › Article › peer-review
Open Access27 Scopus citations -
Genomic analysis of CD8+ NK/T cell line, 'SRIK-NKL', with array-based CGH (aCGH), SKY/FISH and molecular mapping
Rossi, M. R., LaDuca, J., Cowell, J. K., Srivastava, B. I. S. & Matsui, S., Mar 2008, In: Leukemia Research. 32, 3, p. 455-463 9 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Genomic analysis of circular RNAs in heart
Dong, K., He, X., Su, H., Fulton, D. J. R. & Zhou, J., Dec 1 2020, In: BMC Medical Genomics. 13, 1, 167.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Genomic analysis of head and neck squamous cell carcinoma cell lines and human tumors: A rational approach to preclinical model selection
Li, H., Wawrose, J. S., Gooding, W. E., Garraway, L. A., Lui, V. W. Y., Peyser, N. D. & Grandis, J. R., Apr 2014, In: Molecular Cancer Research. 12, 4, p. 571-582 12 p.Research output: Contribution to journal › Article › peer-review
85 Scopus citations -
Genomic analysis of racial differences in triple negative breast cancer
Chang, C. S., Kitamura, E., Johnson, J., Bollag, R. & Hawthorn, L., Dec 2019, In: Genomics. 111, 6, p. 1529-1542 14 p.Research output: Contribution to journal › Article › peer-review
14 Scopus citations -
Genomic analysis of the ecdysone steroid signal at metamorphosis onset using ecdysoneless and EcRnull Drosophila melanogaster mutants
Davis, M. B. & Li, T., Feb 2013, In: Genes and Genomics. 35, 1, p. 21-46 26 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
Genomic analysis of worldwide sheep breeds reveals PDGFD as a major target of fat-tail selection in sheep
Dong, K., Yang, M., Han, J., Ma, Q., Han, J., Song, Z., Luosang, C., Gorkhali, N. A., Yang, B., He, X., Ma, Y. & Jiang, L., Dec 2020, In: BMC Genomics. 21, 1, 800.Research output: Contribution to journal › Article › peer-review
Open Access20 Scopus citations -
Genomic and biological characterization of aggressive and docile strains of lymphocytic choriomeningitis virus rescued from a plasmid-based reverse-genetics system
Chen, M., Lan, S., Ou, R., Price, G. E., Jiang, H., de la Torre, J. C. & Moskophidis, D., Jun 2008, In: Journal of General Virology. 89, 6, p. 1421-1433 13 p.Research output: Contribution to journal › Article › peer-review
11 Scopus citations -
Genomic and Functional Approaches to Understanding Cancer Aneuploidy
The Cancer Genome Atlas Research Network, Apr 9 2018, In: Cancer Cell. 33, 4, p. 676-689.e3Research output: Contribution to journal › Article › peer-review
Open Access423 Scopus citations -
Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas
The Cancer Genome Atlas Research Network, Apr 3 2018, In: Cell Reports. 23, 1, p. 239-254.e6Research output: Contribution to journal › Article › peer-review
Open Access485 Scopus citations -
Genomic and transcriptomic alterations associated with STAT3 activation in head and neck cancer
Peyser, N. D., Pendleton, K., Gooding, W. E., Lui, V. W. Y., Johnson, D. E. & Grandis, J. R., Nov 1 2016, In: PloS one. 11, 11, e0166185.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Genomic characterization of non-small-cell lung cancer in African Americans by targeted massively parallel sequencing
Araujo, L. H., Timmers, C., Bell, E. H., Shilo, K., Lammers, P. E., Zhao, W., Natarajan, T. G., Miller, C. J., Zhang, J., Yilmaz, A. S., Liu, T., Coombes, K., Amann, J. & Carbone, D. P., Jun 10 2015, In: Journal of Clinical Oncology. 33, 17, p. 1966-1973 8 p.Research output: Contribution to journal › Article › peer-review
33 Scopus citations -
Genomic correlate of exceptional erlotinib response in head and neck squamous cell carcinoma
Van Allen, E. M., Lui, V. W. Y., Egloff, A. M., Goetz, E. M., Li, H., Johnson, J. T., Duvvuri, U., Bauman, J. E., Stransky, N., Zeng, Y., Gilbert, B. R., Pendleton, K. P., Wang, L., Chiosea, S., Sougnez, C., Wagle, N., Zhang, F., Du, Y., Close, D., Johnston, P. A., & 7 others , May 1 2015, In: JAMA Oncology. 1, 2, p. 238-244 7 p.Research output: Contribution to journal › Article › peer-review
Open Access42 Scopus citations -
Genomic Diversity of Type B3 Bacteriophages of Caulobacter crescentus
Ash, K. T., Drake, K. M., Gibbs, W. S. & Ely, B., Jul 1 2017, In: Current Microbiology. 74, 7, p. 779-786 8 p.Research output: Contribution to journal › Article › peer-review
7 Scopus citations -
Genomic expression analysis by single-cell mRNA differential display of quiescent CD8 T cells from tumour-infiltrating lymphocytes obtained from in vivo liver tumours
Zhang, W., Ding, J., Qu, Y., Hu, H., Lin, M., Datta, A., Larson, A., Liu, G. E. & Li, B., May 2009, In: Immunology. 127, 1, p. 83-90 8 p.Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
Genomic locus modulating corneal thickness in the mouse identifies POU6F2 as a potential risk of developing glaucoma
International Glaucoma Genetics Consortium & NEIGHBORHOOD Consortium, Jan 1 2018, In: PLoS Genetics. 14, 1, e1007145.Research output: Contribution to journal › Article › peer-review
Open Access16 Scopus citations -
Genomic organization, 5'-flanking region and chromosomal localization of the human RGS3 gene
Eapen, A. K., Chatterjee, T. K., Kanis, A. B. & Fisher, R. A., 1997, In: FASEB Journal. 11, 9, p. A1214Research output: Contribution to journal › Article › peer-review
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Genomic organization, 5′-flanking region, and chromosomal localization of the human RGS3 gene
Chatterjee, T. K., Eapen, A., Kanis, A. B. & Fisher, R. A., 1997, In: Genomics. 45, 2, p. 429-433 5 p., GE974929.Research output: Contribution to journal › Article › peer-review
14 Scopus citations -
Genomic organization and expression profile of the human and mouse WAVE gene family
Sossey-Alaoui, K., Head, K., Nowak, N. & Cowell, J. K., May 1 2003, In: Mammalian Genome. 14, 5, p. 314-322 9 p.Research output: Contribution to journal › Article › peer-review
40 Scopus citations -
Genomic organization of the rat pituitary adenylate cyclase-activating polypeptide receptor gene. Alternative splicing within the 5'-untranslated region
Chatterjee, T. K., Liu, X., Davisson, R. L. & Fisher, R. A., May 2 1997, In: Journal of Biological Chemistry. 272, 18, p. 12122-12131 10 p.Research output: Contribution to journal › Article › peer-review
Open Access40 Scopus citations -
Genomic profiling of myeloid sarcoma by array comparative genomic hybridization
Deeb, G., Baer, M. R., Gaile, D. P., Jani Sait, S. N., Barcos, M., Wetzler, M., Conroy, J. M., Nowak, N. J., Cowell, J. K. & Cheney, R. T., Dec 2005, In: Genes Chromosomes and Cancer. 44, 4, p. 373-383 11 p.Research output: Contribution to journal › Article › peer-review
28 Scopus citations -
Genomic scan reveals loci under altitude adaptation in Tibetan and Dahe pigs
Dong, K., Yao, N., Pu, Y., He, X., Zhao, Q., Luan, Y., Guan, W., Rao, S. & Ma, Y., Oct 17 2014, In: PloS one. 9, 10, e110520.Research output: Contribution to journal › Article › peer-review
Open Access35 Scopus citations -
Genomic screen for expression pattern in adult Drosophila brains In vivo by enhancer trap method and establishment of expression database
Liu, X. J., Yuan, X. J., Sun, K., Shuai, Y. C., Song, Q. X., Wang, L., Shao, L. S., Zhao, X. Y., Lü, Y. S., Lü, Y. B., Wang, L. Z. & Zhong, Y., Jun 2008, In: Progress in Biochemistry and Biophysics. 35, 6, p. 645-649 5 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Genomic signatures predict the immunogenicity of BRCA-deficient breast cancer
Kraya, A. A., Maxwell, K. N., Wubbenhorst, B., Wenz, B. M., Pluta, J., Rech, A. J., Dorfman, L. M., Lunceford, N., Barrett, A., Mitra, N., Morrissette, J. J. D., Feldman, M., Nayak, A., Domchek, S. M., Vonderheide, R. H. & Nathanson, K. L., 2019, In: Clinical Cancer Research. 25, 14, p. 4363-4374 12 p.Research output: Contribution to journal › Article › peer-review
48 Scopus citations -
Genomic structure of the human tetratricopeptide repeat-containing gene, TTC4, from chromosome region 1p31 and mutation analysis in breast cancers.
Su, G., Casey, G. & Cowell, J. K., Jan 1 2000, In: International Journal of Molecular Medicine. 5, 2, p. 197-200 4 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Genomic variation by whole-genome SNP mapping arrays predicts time-to-event outcome in patients with chronic lymphocytic Leukemia: A comparison of CLL and HapMap genotypes
Schweighofer, C. D., Coombes, K. R., Majewski, T., Barron, L. L., Lerner, S., Sargent, R. L., O'Brien, S., Ferrajoli, A., Wierda, W. G., Czerniak, B. A., Medeiros, L. J., Keating, M. J. & Abruzzo, L. V., Mar 2013, In: Journal of Molecular Diagnostics. 15, 2, p. 196-209 14 p.Research output: Contribution to journal › Article › peer-review
Open Access21 Scopus citations -
Genotype and phenotype of patients with gonadotropin-releasing hormone receptor mutations
Kim, H. G., Pedersen-White, J., Bhagavath, B. & Layman, L. C., Apr 8 2010, In: Frontiers of Hormone Research. 39, p. 94-110 17 p.Research output: Contribution to journal › Article › peer-review
23 Scopus citations -
Genotype and tissue-specific effects on alternative splicing of the transcription factor 7-like 2 gene in humans
Mondal, A. K., Das, S. K., Baldini, G., Chu, W. S., Sharma, N. K., Hackney, O. G., Zhao, J., Grant, S. F. A. & Elbein, S. C., Mar 2010, In: Journal of Clinical Endocrinology and Metabolism. 95, 3, p. 1450-1457 8 p.Research output: Contribution to journal › Article › peer-review
52 Scopus citations -
Genotype–phenotype correlations in children with hht
the Brain Vascular Malformation Consortium HHT Investigator Group, Sep 2020, In: Journal of Clinical Medicine. 9, 9, p. 1-9 9 p., 2714.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Genotype-phenotype study of familial haemophagocytic lymphohistiocytosis due to perforin mutations
Trizzino, A., Zur Stadt, U., Ueda, I., Risma, K., Janka, G., Ishii, E., Beutel, K., Sumegi, J., Cannella, S., Pende, D., Mian, A., Henter, J. I., Griffiths, G., Santoro, A., Filipovich, A. & Aricò, M., Jan 2008, In: Journal of medical genetics. 45, 1, p. 15-21 7 p.Research output: Contribution to journal › Article › peer-review
108 Scopus citations -
Genotypic analysis of the protease and reverse transcriptase of HIV type 1 subtype C isolates from antiretroviral drug-naive adults in Malawi
Petch, L. A., Hoffman, I. F., Jere, C. S., Kazembe, P. N., Martinson, F. E., Chilongozi, D., Fiscus, S. A. & Cohen, M. S., Sep 2005, In: AIDS Research and Human Retroviruses. 21, 9, p. 799-805 7 p.Research output: Contribution to journal › Article › peer-review
23 Scopus citations -
Genotypic and functional roles of IL-1B and IL-1RN on the risk of gastroesophageal reflux disease: the presence of IL-1B-511*T/IL-1RN*1 (T1) haplotype may protect against the disease
Chourasia, D., Achyut, B. R., Tripathi, S., Mittal, B., Mittal, R. D. & Ghoshal, U. C., Nov 2009, In: American Journal of Gastroenterology. 104, 11, p. 2704-13 10 p.Research output: Contribution to journal › Article › peer-review
39 Scopus citations -
Genotypic susceptibility scores and HIV type 1 RNA responses in treatment-experienced subjects with HIV type 1 infection
Anderson, J. A., Jiang, H., Ding, X., Petch Lee, L. A., Journigan, T., Fiscus, S. A., Haubrich, R., Katzenstein, D., Swanstrom, R. & Gulick, R. M., May 1 2008, In: AIDS Research and Human Retroviruses. 24, 5, p. 685-694 10 p.Research output: Contribution to journal › Article › peer-review
24 Scopus citations -
Geographical dimensions and correlates of trust
Greenberg, M. R. & Williams, B., Apr 1999, In: Risk Analysis. 19, 2, p. 159-169 11 p.Research output: Contribution to journal › Article › peer-review
23 Scopus citations -
Geographic and Race/Ethnicity Differences in Patient Perceptions of Diabetes
Ledford, C. J. W., Seehusen, D. A. & Crawford, P. F., May 1 2019, In: Journal of Primary Care and Community Health. 10Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Geographic and temporal trends in isolation and antifungal susceptibility of Candida parapsilosis: A global assessment from the ARTEMIS DISK Antifungal Surveillance Program, 2001 to 2005
Pfaller, M. A., Diekema, D. J., Gibbs, D. L., Newell, V. A., Ng, K. P., Colombo, A., Finquelievich, J., Barnes, R., Wadula, J., Finquelievich, J., Tiraboschi, N., Ellis, D., Fameree, D., van den Abeele, A. M., Senterre, J. M., Lopez Colombo, A., Rennie, R., Sanche, S., Bijie, H., Xu, Y., & 81 others , Mar 2008, In: Journal of clinical microbiology. 46, 3, p. 842-849 8 p.Research output: Contribution to journal › Article › peer-review
93 Scopus citations -
Geographic disparity of outcome in patients with cancer over decades: The surveillance, epidemiology, and end results.
Sakurai, K., Kantarjian, H. M., Sasaki, K., Jabbour, E., Ravandi, F., Konopleva, M., Borthakur, G., Wierda, W. G., Daver, N. G., Takahashi, K., Naqvi, K., Dinardo, C. D., Bravo, G. M., Issa, G. C., Jain, P., Pierce, S. A., Soltysiak, K. A., Garcia-manero, G., Tingen, M. S. & Cortes, J. E., May 20 2020, In: Journal of Clinical Oncology. 38, 15_suppl, p. 1574-1574Research output: Contribution to journal › Article › peer-review
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Geographic distribution of racial differences in mortality in muscle-invasive bladder cancer patients: an opportunity for improvement
Freudenburg, E., Shan, Y., Martinez, A., Srinivasan, A., Movva, G., Yu, A., AlBayyaa, M., Klaassen, Z., Freedland, S. J., Kamat, A. M. & Williams, S. B., Apr 2022, In: Cancer Causes and Control. 33, 4, p. 613-622 10 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations