Divergence of genetic sequences for the vacuolating cytotoxin among Helicobacter pylori strains

Timothy L. Cover, Murali K.R. Tummuru, Ping Cao, Stuart A Thompson, Martin J. Blaser

Research output: Contribution to journalArticle

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Abstract

Approximately 50% of Helicobacter pylori isolates produce a cytotoxin in vitro that induces vacuolation of eukaryotic cells. Screening a AZapII library of H. pylori 60190 chromosomal fragments permitted the identification of a 3864-base pair (bp) open reading frame (vacA) that encoded the vacuolating cytotoxin, and a ≥567-bp upstream gene that was homologous to Escherichia coli cysteinyl-tRNA synthetase. The sequence data suggest that a 33-amino-acid leader sequence and a C-terminal peptide are cleaved from a 139-kDa protoxin to yield the mature 87-kDa cytotoxin. The vacA gene product contains a C-terminal motif that is present in several other bacterial proteins that undergo C-terminal cleavage, including IgA proteases of Haemophilus influenzae and Neisseria gonorrhoeae. Isogenic H. pylori mutants with insertional mutation of the vacA gene lacked vacuolating cytotoxin activity and failed to produce the 87-kDa protein. Southern analysis of naturally occurring tox- H. pylori strains with vacA probes indicated the presence of hybridizing bands, but both Southern analysis and polymerase chain reaction studies suggested that the vacA sequences of tox- strains differed from those of tox+ strains. Sequence analysis of a 1541-bp region of polymerase chain reaction-amplified vacA from tox- strain 87-203 indicated 64.8% amino acid identity with the corresponding region from tox+ strain 60190. Thus, sequence divergence in vacA genes may explain the lack of functionally active cytotoxin production by some H. pylori isolates.

Original languageEnglish (US)
Pages (from-to)10566-10573
Number of pages8
JournalJournal of Biological Chemistry
Volume269
Issue number14
StatePublished - Apr 8 1994
Externally publishedYes

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Cytotoxins
Helicobacter pylori
Genes
Base Pairing
IgA-specific serine endopeptidase
cysteinyl-tRNA synthetase
Polymerase chain reaction
Amino Acids
Polymerase Chain Reaction
Bacterial Proteins
Neisseria gonorrhoeae
Haemophilus influenzae
Eukaryotic Cells
Protein C
Escherichia coli
Open Reading Frames
Libraries
Sequence Analysis
Amino Acid Sequence
Screening

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Cell Biology

Cite this

Divergence of genetic sequences for the vacuolating cytotoxin among Helicobacter pylori strains. / Cover, Timothy L.; Tummuru, Murali K.R.; Cao, Ping; Thompson, Stuart A; Blaser, Martin J.

In: Journal of Biological Chemistry, Vol. 269, No. 14, 08.04.1994, p. 10566-10573.

Research output: Contribution to journalArticle

Cover, Timothy L. ; Tummuru, Murali K.R. ; Cao, Ping ; Thompson, Stuart A ; Blaser, Martin J. / Divergence of genetic sequences for the vacuolating cytotoxin among Helicobacter pylori strains. In: Journal of Biological Chemistry. 1994 ; Vol. 269, No. 14. pp. 10566-10573.
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