The complete mitochondrial genome of the sand-hopper Trinorchestia longiramus (Amphipoda: Talitridae)

Ajit Kumar Patra; Min Seop Kim; Tae Won Jung; In Young Cho; Moongeun Yoon; Jeong Hyeon Choi; Youngik Yang

doi:10.1080/23802359.2019.1623100

The complete mitochondrial genome of the sand-hopper Trinorchestia longiramus (Amphipoda: Talitridae)

Ajit Kumar Patra, Min Seop Kim, Tae Won Jung, In Young Cho, Moongeun Yoon, Jeong Hyeon Choi, Youngik Yang

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Abstract

The complete mitochondrial genome of sand-hopper Trinorchestia longiramus was analyzed in this study, which is the first for the genus within the family Talitridae. The mitogenome sequence is 15,401 bp in length containing two ribosomal RNA genes, 22 transfer RNA genes, 13 protein-coding genes, and a control region as found in most amphipods. The gene order showed that T. longiramus has a unique control region location compared to other amphipods. Phylogenetic analysis using the maximum likelihood method positioned T. longiramus within the monophyletic clades of the family Talitridae.

Original language	English (US)
Pages (from-to)	2104-2105
Number of pages	2
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	2
DOIs	https://doi.org/10.1080/23802359.2019.1623100
State	Published - Jul 3 2019
Externally published	Yes

Keywords

Sand-hopper
Talitridae
Trinorchestia longiramus
mitochondria
phylogeny

ASJC Scopus subject areas

Molecular Biology
Genetics

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10.1080/23802359.2019.1623100

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title = "The complete mitochondrial genome of the sand-hopper Trinorchestia longiramus (Amphipoda: Talitridae)",

abstract = "The complete mitochondrial genome of sand-hopper Trinorchestia longiramus was analyzed in this study, which is the first for the genus within the family Talitridae. The mitogenome sequence is 15,401 bp in length containing two ribosomal RNA genes, 22 transfer RNA genes, 13 protein-coding genes, and a control region as found in most amphipods. The gene order showed that T. longiramus has a unique control region location compared to other amphipods. Phylogenetic analysis using the maximum likelihood method positioned T. longiramus within the monophyletic clades of the family Talitridae.",

keywords = "Sand-hopper, Talitridae, Trinorchestia longiramus, mitochondria, phylogeny",

author = "{Kumar Patra}, Ajit and Kim, {Min Seop} and Jung, {Tae Won} and Cho, {In Young} and Moongeun Yoon and Choi, {Jeong Hyeon} and Youngik Yang",

note = "Funding Information: The authors are grateful to the National Marine Biodiversity Institute of Korea for financially supporting this study by in-house Research Program [2019M00800 and 2019M00300]. Publisher Copyright: {\textcopyright} 2019, {\textcopyright} 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.",

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doi = "10.1080/23802359.2019.1623100",

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AU - Kumar Patra, Ajit

AU - Kim, Min Seop

AU - Jung, Tae Won

AU - Cho, In Young

AU - Yoon, Moongeun

AU - Choi, Jeong Hyeon

AU - Yang, Youngik

N1 - Funding Information: The authors are grateful to the National Marine Biodiversity Institute of Korea for financially supporting this study by in-house Research Program [2019M00800 and 2019M00300]. Publisher Copyright: © 2019, © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

PY - 2019/7/3

Y1 - 2019/7/3

N2 - The complete mitochondrial genome of sand-hopper Trinorchestia longiramus was analyzed in this study, which is the first for the genus within the family Talitridae. The mitogenome sequence is 15,401 bp in length containing two ribosomal RNA genes, 22 transfer RNA genes, 13 protein-coding genes, and a control region as found in most amphipods. The gene order showed that T. longiramus has a unique control region location compared to other amphipods. Phylogenetic analysis using the maximum likelihood method positioned T. longiramus within the monophyletic clades of the family Talitridae.

AB - The complete mitochondrial genome of sand-hopper Trinorchestia longiramus was analyzed in this study, which is the first for the genus within the family Talitridae. The mitogenome sequence is 15,401 bp in length containing two ribosomal RNA genes, 22 transfer RNA genes, 13 protein-coding genes, and a control region as found in most amphipods. The gene order showed that T. longiramus has a unique control region location compared to other amphipods. Phylogenetic analysis using the maximum likelihood method positioned T. longiramus within the monophyletic clades of the family Talitridae.

KW - Sand-hopper

KW - Talitridae

KW - Trinorchestia longiramus

KW - mitochondria

KW - phylogeny

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The complete mitochondrial genome of the sand-hopper Trinorchestia longiramus (Amphipoda: Talitridae)

Abstract

Keywords

ASJC Scopus subject areas

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