Innovative grid technologies applied to bioinformatics and hurricane mitigation

Rosa Badia, Gargi Dasgupta, Onyeka Ezenwoye, Liana Fong, Howard Ho, Sawsan Khuri, Yanbin Liu, Steve Luis, Anthony Praino, Jean Pierre Prost, Ahmed Radwan, Seyed Masoud Sadjadi, Shivkumar Shivaji, Balaji Viswanathan, Patrick Welsh, Akmal Younis

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

The Latin American Grid (LA Grid) joint research program fosters collaborative research across eleven universities and IBM Research with the objective of developing innovative grid technologies and applying them to solve challenging problems in the application areas of bioinformatics and hurricane mitigation. This paper describes some of these innovative technologies, such as the support for transparent to the application expert grid enablement, meta-scheduling, job flows, data integration, and custom visualization, and shows how these technologies will be leveraged in the LA Grid infrastructure to provide solutions to pharmagenomics problems and hurricane prediction ensemble simulations.

Original languageEnglish (US)
Title of host publicationHigh Performance Computing and Grids in Action
PublisherIOS Press BV
Pages436-462
Number of pages27
ISBN (Print)9781586038397
StatePublished - Jan 1 2008

Publication series

NameAdvances in Parallel Computing
Volume16
ISSN (Print)0927-5452

Fingerprint

Hurricanes
Bioinformatics
Data integration
Visualization
Scheduling

Keywords

  • Meta-scheduling
  • bioinformatics
  • custom visualization
  • data integration
  • hurricane mitigation
  • job flows
  • transparent grid enablement

ASJC Scopus subject areas

  • Computer Science(all)

Cite this

Badia, R., Dasgupta, G., Ezenwoye, O., Fong, L., Ho, H., Khuri, S., ... Younis, A. (2008). Innovative grid technologies applied to bioinformatics and hurricane mitigation. In High Performance Computing and Grids in Action (pp. 436-462). (Advances in Parallel Computing; Vol. 16). IOS Press BV.

Innovative grid technologies applied to bioinformatics and hurricane mitigation. / Badia, Rosa; Dasgupta, Gargi; Ezenwoye, Onyeka; Fong, Liana; Ho, Howard; Khuri, Sawsan; Liu, Yanbin; Luis, Steve; Praino, Anthony; Prost, Jean Pierre; Radwan, Ahmed; Sadjadi, Seyed Masoud; Shivaji, Shivkumar; Viswanathan, Balaji; Welsh, Patrick; Younis, Akmal.

High Performance Computing and Grids in Action. IOS Press BV, 2008. p. 436-462 (Advances in Parallel Computing; Vol. 16).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Badia, R, Dasgupta, G, Ezenwoye, O, Fong, L, Ho, H, Khuri, S, Liu, Y, Luis, S, Praino, A, Prost, JP, Radwan, A, Sadjadi, SM, Shivaji, S, Viswanathan, B, Welsh, P & Younis, A 2008, Innovative grid technologies applied to bioinformatics and hurricane mitigation. in High Performance Computing and Grids in Action. Advances in Parallel Computing, vol. 16, IOS Press BV, pp. 436-462.
Badia R, Dasgupta G, Ezenwoye O, Fong L, Ho H, Khuri S et al. Innovative grid technologies applied to bioinformatics and hurricane mitigation. In High Performance Computing and Grids in Action. IOS Press BV. 2008. p. 436-462. (Advances in Parallel Computing).
Badia, Rosa ; Dasgupta, Gargi ; Ezenwoye, Onyeka ; Fong, Liana ; Ho, Howard ; Khuri, Sawsan ; Liu, Yanbin ; Luis, Steve ; Praino, Anthony ; Prost, Jean Pierre ; Radwan, Ahmed ; Sadjadi, Seyed Masoud ; Shivaji, Shivkumar ; Viswanathan, Balaji ; Welsh, Patrick ; Younis, Akmal. / Innovative grid technologies applied to bioinformatics and hurricane mitigation. High Performance Computing and Grids in Action. IOS Press BV, 2008. pp. 436-462 (Advances in Parallel Computing).
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